Publications

As an active research lab, we are committed to advancing the field of neuroimaging through our published works. Below you can find a list of our publications, including journal articles, conference papers, and book chapters. These works reflect our dedication to innovation and collaboration in the scientific community. Please note that this list is continually updated as new research is published thanks to the hard work of Manubot, highlighted below.

Highlighted

Open collaborative writing with Manubot

Daniel S. Himmelstein, Vincent Rubinetti, David R. Slochower, Dongbo Hu, Venkat S. Malladi, Casey S. Greene, Anthony Gitter

PLOS Computational Biology  ·  04 Dec 2020  ·  doi:10.1371/journal.pcbi.1007128

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open-science collaboration

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2025

Differentiating CSF flow artifacts from pathology: an educational review

Vivek Pai, Alexandre Boutet, Mikail Malik, Yash Patel, Sriranga Kashyap, Jurgen Germann, Kanchan Gupta, Bhujang Pai, Birgit Betina Ertl-Wagner, Bela Purohit

Insights into Imaging  ·  22 Dec 2025  ·  doi:10.1186/s13244-025-02153-9

Multiscale characterisation of the human claustrum from histology to MRI

Navona Calarco, Skerdi Progri, Sriranga Kashyap, Shuting Xie, Claude Lepage, Boris C. Bernhardt, Alan C. Evans, Kamil Uludag

openRxiv  ·  09 Dec 2025  ·  doi:10.64898/2025.12.06.692728

Evaluating the quality of brainstem ROI registration using structural and diffusion MRI

Yi-An A. Chen, Lars Kasper, Clement T. Chow, Alexandre Boutet, Jürgen Germann, Andres M. Lozano, Kâmil Uludağ, Andreea O. Diaconescu, Sriranga Kashyap

openRxiv  ·  22 Sep 2025  ·  doi:10.1101/2025.09.22.675000

Blood volume sensitive laminar fMRI with VASO in human hippocampus: Capabilities and biophysical challenges at clinical 7T scanners

Khazar Ahmadi, Stephanie Swegle, Sriranga Kashyap, Antoine Bouyeure, Peter Bandettini, Nikolai Axmacher, Laurentius (Renzo) Huber

openRxiv  ·  29 Aug 2025  ·  doi:10.1101/2025.08.25.672075

A network‐assisted joint image and motion estimation approach for robust 3D MRI motion correction across severity levels

Brian Nghiem, Zhe Wu, Sriranga Kashyap, Lars Kasper, Kâmil Uludağ

Magnetic Resonance in Medicine  ·  29 Aug 2025  ·  doi:10.1002/mrm.70052

A network-assisted joint image and motion estimation approach for robust 3D MRI motion correction across severity levels.

Brian Nghiem, Zhe Wu, Sriranga Kashyap, Lars Kasper, Kâmil Uludağ

Magnetic resonance in medicine  ·  29 Aug 2025  ·  pubmed:40883879

Cerebellar Dentate Cavernoma Enlargement and Tremor Emergence: Longitudinal Neuroimaging Analysis of Case Report and Literature Review

Andrew Z. Yang, Tiffany Rodrigues, Sriranga Kashyap, Yash Patel, Arjun Balachandar, …, Alfonso Fasano, Suneil K. Kalia, Andres M. Lozano, Marie Slegr, Alexandre Boutet

Movement Disorders Clinical Practice  ·  19 May 2025  ·  doi:10.1002/mdc3.70130

Whole-brain BOLD responses to graded hypoxic challenges at 7 T, 9.4 T, and 15.2 T: Implications for ultrahigh-field functional and dynamic susceptibility contrast MRI.

Thuy Thi Le, Sang Han Choi, Geun Ho Im, Chanhee Lee, Dongkyu Lee, Jacob Schulman, HyungJoon Cho, Kamil Uludağ, Seong-Gi Kim

Magnetic resonance in medicine  ·  18 Feb 2025  ·  pubmed:39963739

Functional MRI reveals brain activation patterns associated with optimization of spinal cord stimulation parameters in treating chronic pain.

Artur Vetkas, Cletus Cheyuo, Ajmal Zemmar, Brendan Santyr, Clement T Chow, …, Andrew Z Yang, Simon J Graham, Kâmil Uludağ, Anuj Bhatia, Andres M Lozano

Brain stimulation  ·  16 Jan 2025  ·  pubmed:39826636

Predictive acoustical processing in human cortical layers

Lonike K. Faes, Isma Zulfiqar, Luca Vizioli, Zidan Yu, Yuan-Hao Wu, …, Ryszard Auksztulewicz, Lucia Melloni, Kamil Uludag, Essa Yacoub, Federico De Martino

Cold Spring Harbor Laboratory  ·  10 Jan 2025  ·  doi:10.1101/2025.01.09.632099

Predictive acoustical processing in human cortical layers.

Lonike K Faes, Isma Zulfiqar, Luca Vizioli, Zidan Yu, Yuan-Hao Wu, …, Ryszard Auksztulewicz, Lucia Melloni, Kamil Uludag, Essa Yacoub, Federico De Martino

bioRxiv : the preprint server for biology  ·  09 Jan 2025  ·  pubmed:39829870

Characterizing BOLD activation patterns in the human hippocampus with laminar fMRI

Viktor Pfaffenrot, Antoine Bouyeure, Carlos Alexandre Gomes, Sriranga Kashyap, Nikolai Axmacher, David G. Norris

Imaging Neuroscience  ·  01 Jan 2025  ·  doi:10.1162/imag_a_00532

Problems and solutions in quantifying cerebrovascular reactivity using BOLD-MRI

Jacob B. Schulman, Kamil Uludağ

Imaging Neuroscience  ·  01 Jan 2025  ·  doi:10.1162/imag_a_00556

2024

White matter organization abnormalities in adults with 47,XXX: A 7 Tesla MRI study

Chaira Serrarens, Sriranga Kashyap, Maarten Otter, Bea C.M. Campforts, Constance T.R.M. Stumpel, David E.J. Linden, Thérèse A.M.J. van Amelsvoort, Claudia Vingerhoets

Psychiatry Research: Neuroimaging  ·  01 Dec 2024  ·  doi:10.1016/j.pscychresns.2024.111915

Phantom Safety Assessment of 3 Tesla Magnetic Resonance Imaging in Directional and Sensing Deep Brain Stimulation Devices.

Riccardo Ludovichetti, Clement T Chow, Sriranga Kashyap, Ian Connell, Benson Yang, …, Jürgen Germann, Artur Vetkas, Kâmil Uludağ, Andres M Lozano, Alexandre Boutet

Stereotactic and functional neurosurgery  ·  27 Nov 2024  ·  pubmed:39602889

Transformer-aided dynamic causal model for scalable estimation of effective connectivity.

Sayan Nag, Kamil Uludag

Imaging neuroscience (Cambridge, Mass.)  ·  23 Sep 2024  ·  pubmed:40800338

Intracortical myelin across laminae in adult individuals with 47,XXX: a 7 Tesla MRI study

Chaira Serrarens, Julia Ruiz-Fernandez, Maarten Otter, Bea C M Campforts, Constance T R M Stumpel, David E J Linden, Therese A M J van Amelsvoort, Sriranga Kashyap, Claudia Vingerhoets

Cerebral Cortex  ·  01 Aug 2024  ·  doi:10.1093/cercor/bhae343

Characterizing BOLD activation patterns in the human hippocampus with laminar fMRI

Viktor Pfaffenrot, Antoine Bouyeure, Carlos Alexandre Gomes, Sriranga Kashyap, Nikolai Axmacher, David G Norris

openRxiv  ·  08 Jul 2024  ·  doi:10.1101/2024.07.04.602065

Laminar CBV and BOLD response-characteristics over time and space in the human primary somatosensory cortex at 7T

Sebastian Dresbach, Omer Faruk Gulban, Till Steinbach, Judith Eck, Sriranga Kashyap, Amanda Kaas, Nikolaus Weiskopf, Rainer Goebel, Renzo Huber

openRxiv  ·  30 Jun 2024  ·  doi:10.1101/2024.06.26.600746

GIRFReco.jl: An Open-Source Pipeline for Spiral Magnetic Resonance Image (MRI) Reconstruction in Julia

Alexander Jaffray, Zhe Wu, S. Johanna Vannesjo, Kâmil Uludağ, Lars Kasper

Journal of Open Source Software  ·  02 May 2024  ·  doi:10.21105/joss.05877

The coming decade of digital brain research: A vision for neuroscience at the intersection of technology and computing.

Katrin Amunts, Markus Axer, Swati Banerjee, Lise Bitsch, Jan G Bjaalie, …, Wim Vanduffel, Julien Vezoli, Lisa Vincenz-Donnelly, Florian Walter, Laszlo Zaborszky

Imaging neuroscience (Cambridge, Mass.)  ·  18 Apr 2024  ·  pubmed:40800542

Non-invasive perfusion MR imaging of the human brain via breath-holding

J. B. Schulman, S. Kashyap, S. G. Kim, K. Uludağ

Scientific Reports  ·  27 Mar 2024  ·  doi:10.1038/s41598-024-58086-8

Insights into hippocampal perfusion using high-resolution, multi-modal 7T MRI

Roy A. M. Haast, Sriranga Kashyap, Dimo Ivanov, Mohamed D. Yousif, Jordan DeKraker, Benedikt A. Poser, Ali R. Khan

Proceedings of the National Academy of Sciences  ·  06 Mar 2024  ·  doi:10.1073/pnas.2310044121

Feasibility of high-resolution perfusion imaging using arterial spin labeling MRI at 3 Tesla

Sriranga Kashyap, Ícaro Agenor Ferreira Oliveira, Kâmil Uludağ

Frontiers in Physiology  ·  03 Jan 2024  ·  doi:10.3389/fphys.2023.1271254

Feasibility of high-resolution perfusion imaging using arterial spin labeling MRI at 3 Tesla.

Sriranga Kashyap, Ícaro Agenor Ferreira Oliveira, Kâmil Uludağ

Frontiers in physiology  ·  03 Jan 2024  ·  pubmed:38235379

2023

Non-Invasive Perfusion MR Imaging of the Human Brain via Breath-Holding

J.B. Schulman, S. Kashyap, S.G. Kim, K. Uludağ

Cold Spring Harbor Laboratory  ·  26 Aug 2023  ·  doi:10.1101/2023.08.24.554712

Feasibility of high-resolution perfusion imaging using Arterial Spin Labelling MRI at 3 Tesla

Sriranga Kashyap, ĺcaro Agenor Ferreira Oliveira, Kâmil Uludağ

Cold Spring Harbor Laboratory  ·  05 Aug 2023  ·  doi:10.1101/2023.08.02.551576

Physiological modeling of the BOLD signal and implications for effective connectivity: A primer

Kâmil Uludağ

NeuroImage  ·  01 Aug 2023  ·  doi:10.1016/j.neuroimage.2023.120249

Novel insights into hippocampal perfusion using high-resolution, multi-modal 7T MRI

Roy A. M. Haast, Sriranga Kashyap, Dimo Ivanov, Mohamed D. Yousif, Jordan DeKraker, Benedikt A. Poser, Ali R. Khan

openRxiv  ·  21 Jul 2023  ·  doi:10.1101/2023.07.19.549533

Physiological modeling of the BOLD signal and implications for effective connectivity: A primer.

Kâmil Uludağ

NeuroImage  ·  24 Jun 2023  ·  pubmed:37356779

Magnetic resonance imaging at 9.4 T: the Maastricht journey

Dimo Ivanov, Federico De Martino, Elia Formisano, Francisco J. Fritz, Rainer Goebel, …, Bettina Sorger, Desmond H. Y. Tse, Kâmil Uludağ, Christopher J. Wiggins, Benedikt A. Poser

Magnetic Resonance Materials in Physics, Biology and Medicine  ·  20 Apr 2023  ·  doi:10.1007/s10334-023-01080-4

Magnetic resonance imaging at 9.4 T: the Maastricht journey.

Dimo Ivanov, Federico De Martino, Elia Formisano, Francisco J Fritz, Rainer Goebel, …, Bettina Sorger, Desmond H Y Tse, Kâmil Uludağ, Christopher J Wiggins, Benedikt A Poser

Magma (New York, N.Y.)  ·  20 Apr 2023  ·  pubmed:37081247

Dynamic Effective Connectivity using Physiologically informed Dynamic Causal Model with Recurrent Units: A functional Magnetic Resonance Imaging simulation study.

Sayan Nag, Kamil Uludag

Frontiers in human neuroscience  ·  01 Mar 2023  ·  pubmed:36936613

DSC MRI in the human brain using deoxyhemoglobin and gadolinium-Simulations and validations at 3T.

Jacob Benjamin Schulman, Ece Su Sayin, Angelica Manalac, Julien Poublanc, Olivia Sobczyk, James Duffin, Joseph A Fisher, David Mikulis, Kâmil Uludağ

Frontiers in neuroimaging  ·  20 Feb 2023  ·  pubmed:37554650

Editorial for "Comparison of a Deep Learning-Accelerated vs. Conventional T2-Weighted Sequence in Biparametric MRI of the Prostate".

Zhe Wu, Rajesh Bhayana, Kâmil Uludağ

Journal of magnetic resonance imaging : JMRI  ·  18 Jan 2023  ·  pubmed:36651306

2022

Investigations of hypoxia‐induced deoxyhemoglobin as a contrast agent for cerebral perfusion imaging

Ece Su Sayin, Jacob Schulman, Julien Poublanc, Harrison T. Levine, Lakshmikumar Venkat Raghavan, Kamil Uludag, James Duffin, Joseph A. Fisher, David J. Mikulis, Olivia Sobczyk

Human Brain Mapping  ·  29 Oct 2022  ·  doi:10.1002/hbm.26131

Investigations of hypoxia-induced deoxyhemoglobin as a contrast agent for cerebral perfusion imaging.

Ece Su Sayin, Jacob Schulman, Julien Poublanc, Harrison T Levine, Lakshmikumar Venkat Raghavan, Kamil Uludag, James Duffin, Joseph A Fisher, David J Mikulis, Olivia Sobczyk

Human brain mapping  ·  29 Oct 2022  ·  pubmed:36308389

Resting-state functional connectivity in adults with 47,XXX: a 7 Tesla MRI study

Chaira Serrarens, Sriranga Kashyap, Laura Riveiro-Lago, Maarten Otter, Bea C M Campforts, Constance T R M Stumpel, Henk Jansma, David E J Linden, Thérèse A M J van Amelsvoort, Claudia Vingerhoets

Cerebral Cortex  ·  18 Oct 2022  ·  doi:10.1093/cercor/bhac410

Improved laminar specificity and sensitivity by combining SE and GE BOLD signals.

SoHyun Han, Seulgi Eun, HyungJoon Cho, Kamil Uludaǧ, Seong-Gi Kim

NeuroImage  ·  13 Oct 2022  ·  pubmed:36243267

Inconsistencies in atlas-based volumetric measures of the human nucleus basalis of Meynert: A need for high-resolution alternatives

Yawen Wang, Minye Zhan, Alard Roebroeck, Peter De Weerd, Sriranga Kashyap, Mark J. Roberts

NeuroImage  ·  01 Oct 2022  ·  doi:10.1016/j.neuroimage.2022.119421

Functional brain imaging by CW-NIRS coregistered by blood flow monitors

Proceedings of SPIE - The International Society for Optical Engineering  ·  25 May 2022  ·  [no id info]

Measuring the effects of indomethacin on changes in cerebral oxidative metabolism and cerebral blood flow during sensorimotor activation.

Magnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine  ·  25 May 2022  ·  [no id info]

Concurrent CBF and BOLD fMRI with dual-echo spiral simultaneous multi-slice acquisitions at 7T

Denizhan Kurban, Dimo Ivanov, Sriranga Kashyap, Laurentius Huber, Gilad Liberman, Benedikt A. Poser

NeuroImage  ·  01 Feb 2022  ·  doi:10.1016/j.neuroimage.2021.118820

Safety of Magnetic Resonance Imaging in Patients with Deep Brain Stimulation

Clement T. Chow, Sriranga Kashyap, Aaron Loh, Asma Naheed, Nicole Bennett, Laleh Golestanirad, Alexandre Boutet

Magnetic Resonance Imaging in Deep Brain Stimulation  ·  01 Jan 2022  ·  doi:10.1007/978-3-031-16348-7_5

Preoperative Planning of DBS Surgery with MRI

Aaron Loh, Clement T. Chow, Aida Ahrari, Kâmil Uludağ, Sriranga Kashyap, Harith Akram, Ludvic Zrinzo

Magnetic Resonance Imaging in Deep Brain Stimulation  ·  01 Jan 2022  ·  doi:10.1007/978-3-031-16348-7_4

2021

Determining laminar neuronal activity from BOLD fMRI using a generative model

Kamil Uludag, Martin Havlicek

Progress in Neurobiology  ·  01 Dec 2021  ·  doi:10.1016/j.pneurobio.2021.102055

Cerebral perfusion imaging: Hypoxia-induced deoxyhemoglobin or gadolinium?

E.S Sayin, J. Schulman, J. Poublanc, H. Levine, L. Venkatraghavan, K. Uludag, J. Duffin, J.A. Fisher, D.J. Mikulis, O. Sobczyk

Cold Spring Harbor Laboratory  ·  10 Nov 2021  ·  doi:10.1101/2021.11.08.467772

Perfusion MRI using endogenous deoxyhemoglobin as a contrast agent: Preliminary data

Julien Poublanc, Olivia Sobczyk, Reema Shafi, Ece Su Sayin, Jacob Schulman, …, John C. Wood, Chau Vu, Rohan Dharmakumar, Joseph A. Fisher, David J. Mikulis

Magnetic Resonance in Medicine  ·  22 Oct 2021  ·  doi:10.1002/mrm.28974

Perfusion MRI using endogenous deoxyhemoglobin as a contrast agent: Preliminary data.

Julien Poublanc, Olivia Sobczyk, Reema Shafi, Ece Su Sayin, Jacob Schulman, …, John C Wood, Chau Vu, Rohan Dharmakumar, Joseph A Fisher, David J Mikulis

Magnetic resonance in medicine  ·  22 Oct 2021  ·  pubmed:34687064

Laminar fMRI using T2-prepared multi-echo FLASH

Viktor Pfaffenrot, Maximilian N. Voelker, Sriranga Kashyap, Peter J. Koopmans

NeuroImage  ·  01 Aug 2021  ·  doi:10.1016/j.neuroimage.2021.118163

Improvement of sensitivity and specificity for laminar BOLD fMRI with double spin-echo EPI in humans at 7 T.

SoHyun Han, Seulgi Eun, HyungJoon Cho, Kâmil Uludaǧ, Seong-Gi Kim

NeuroImage  ·  27 Jul 2021  ·  pubmed:34324976

Neurodegenerative and functional signatures of the cerebellar cortex in m.3243A>G patients

Roy AM. Haast, Irenaeus FM. De Coo, Dimo Ivanov, Ali R Khan, Jacobus FA. Jansen, Hubert JM. Smeets, Kâmil Uludağ

Cold Spring Harbor Laboratory  ·  30 Apr 2021  ·  doi:10.1101/2021.04.30.442091

Determining laminar neuronal activity from BOLD fMRI using a generative model.

Kamil Uludag, Martin Havlicek

Progress in neurobiology  ·  27 Apr 2021  ·  pubmed:33930519

Sub-millimetre resolution laminar fMRI using Arterial Spin Labelling in humans at 7 T

Sriranga Kashyap, Dimo Ivanov, Martin Havlicek, Laurentius Huber, Benedikt A. Poser, Kâmil Uludağ

PLOS ONE  ·  26 Apr 2021  ·  doi:10.1371/journal.pone.0250504

Sub-millimetre resolution laminar fMRI using Arterial Spin Labelling in humans at 7 T.

Sriranga Kashyap, Dimo Ivanov, Martin Havlicek, Laurentius Huber, Benedikt A Poser, Kâmil Uludağ

PloS one  ·  26 Apr 2021  ·  pubmed:33901230

Effects of MP2RAGE B1+ sensitivity on inter-site T1 reproducibility and hippocampal morphometry at 7T

Roy A.M. Haast, Jonathan C. Lau, Dimo Ivanov, Ravi S. Menon, Kâmil Uludağ, Ali R. Khan

NeuroImage  ·  01 Jan 2021  ·  doi:10.1016/j.neuroimage.2020.117373

2020

Open collaborative writing with Manubot

Daniel S. Himmelstein, Vincent Rubinetti, David R. Slochower, Dongbo Hu, Venkat S. Malladi, Casey S. Greene, Anthony Gitter

PLOS Computational Biology  ·  04 Dec 2020  ·  doi:10.1371/journal.pcbi.1007128

Manubot

Manuscript Source

Website

open-science collaboration

Quantitative and simultaneous measurement of oxygen consumption rates in rat brain and skeletal muscle using ¹⁷O MRS imaging at 16.4T

Hannes M. Wiesner, Dávid Z. Balla, Klaus Scheffler, Kâmil Uğurbil, Xiao‐Hong Zhu, Wei Chen, Kâmil Uludağ, Rolf Pohmann

Magnetic Resonance in Medicine  ·  26 Oct 2020  ·  doi:10.1002/mrm.28552

Quantitative and simultaneous measurement of oxygen consumption rates in rat brain and skeletal muscle using

Hannes M Wiesner, Dávid Z Balla, Klaus Scheffler, Kâmil Uğurbil, Xiao-Hong Zhu, Wei Chen, Kâmil Uludağ, Rolf Pohmann

Magnetic resonance in medicine  ·  26 Oct 2020  ·  pubmed:33104248

Unraveling the contributions to the neuromelanin-MRI contrast.

Nikos Priovoulos, Stan C J van Boxel, Heidi I L Jacobs, Benedikt A Poser, Kamil Uludag, Frans R J Verhey, Dimo Ivanov

Brain structure & function  ·  22 Oct 2020  ·  pubmed:33090274

Effects of MP2RAGE B

Roy A M Haast, Jonathan C Lau, Dimo Ivanov, Ravi S Menon, Kâmil Uludağ, Ali R Khan

NeuroImage  ·  17 Sep 2020  ·  pubmed:32949709

Perfusion MRI using endogenous deoxyhemoglobin as a contrast agent: preliminary data

J. Poublanc, O. Sobczyk, R. Shafi, J. Duffin, K. Uludag, J. Wood, C. Vu, R. Dharmakumar, J.A. Fisher, D.J. Mikulis

Cold Spring Harbor Laboratory  ·  26 Aug 2020  ·  doi:10.1101/2020.08.21.255802

Sub-Millimetre Resolution Laminar Fmri Using Arterial Spin Labelling in Humans at 7 T

Sriranga Kashyap, Dimo Ivanov, Martin Havlicek, Laurentius Huber, Benedikt A. Poser, Kâmil Uludağ

Cold Spring Harbor Laboratory  ·  24 Aug 2020  ·  doi:10.1101/2020.08.22.261693

Direct visualization and characterization of the human zona incerta and surrounding structures

Jonathan C. Lau, Yiming Xiao, Roy A. M. Haast, Greydon Gilmore, Kâmil Uludağ, Keith W. MacDougall, Ravi S. Menon, Andrew G. Parrent, Terry M. Peters, Ali R. Khan

Human Brain Mapping  ·  17 Jul 2020  ·  doi:10.1002/hbm.25137

Direct visualization and characterization of the human zona incerta and surrounding structures.

Jonathan C Lau, Yiming Xiao, Roy A M Haast, Greydon Gilmore, Kâmil Uludağ, Keith W MacDougall, Ravi S Menon, Andrew G Parrent, Terry M Peters, Ali R Khan

Human brain mapping  ·  17 Jul 2020  ·  pubmed:32677751

Dynamic behavior of the locus coeruleus during arousal-related memory processing in a multi-modal 7T fMRI paradigm.

Heidi Il Jacobs, Nikos Priovoulos, Benedikt A Poser, Linda Hg Pagen, Dimo Ivanov, Frans Rj Verhey, Kâmil Uludağ

eLife  ·  24 Jun 2020  ·  pubmed:32579109

Layer-dependent functional connectivity methods.

Laurentius Huber, Emily S Finn, Yuhui Chai, Rainer Goebel, Rüdiger Stirnberg, …, Kamil Uludag, Seong-Gi Kim, SoHyun Han, Peter A Bandettini, Benedikt A Poser

Progress in neurobiology  ·  05 Jun 2020  ·  pubmed:32512115

Feedback contribution to surface motion perception in the human early visual cortex

Ingo Marquardt, Peter De Weerd, Marian Schneider, Omer Faruk Gulban, Dimo Ivanov, Yawen Wang, Kâmil Uludağ

eLife  ·  04 Jun 2020  ·  doi:10.7554/eLife.50933

Feedback contribution to surface motion perception in the human early visual cortex.

Ingo Marquardt, Peter De Weerd, Marian Schneider, Omer Faruk Gulban, Dimo Ivanov, Yawen Wang, Kâmil Uludağ

eLife  ·  04 Jun 2020  ·  pubmed:32496189

Direct visualization and characterization of the human zona incerta and surrounding structures

Jonathan C. Lau, Yiming Xiao, Roy A.M. Haast, Greydon Gilmore, Kamil Uludag, Keith W. MacDougall, Ravi S. Menon, Andrew G. Parrent, Terry M. Peters, Ali R. Khan

Cold Spring Harbor Laboratory  ·  26 Mar 2020  ·  doi:10.1101/2020.03.25.008318

Sub-millimeter fMRI reveals multiple topographical digit representations that form action maps in human motor cortex

Laurentius Huber, Emily S. Finn, Daniel A. Handwerker, Marlene Bönstrup, Daniel R. Glen, …, Natalia Petridou, Sean Marrett, Jozien Goense, Benedikt A. Poser, Peter A. Bandettini

NeuroImage  ·  01 Mar 2020  ·  doi:10.1016/j.neuroimage.2019.116463

Effects of MP2RAGE B₁⁺sensitivity on inter-site T₁reproducibility and morphometry at 7T

Roy AM Haast, Jonathan C Lau, Dimo Ivanov, Ravi S Menon, Kâmil Uludağ, Ali R Khan

Cold Spring Harbor Laboratory  ·  14 Feb 2020  ·  doi:10.1101/2020.02.13.947382

2019

Aerobic Exercise Training Improves Cerebral Blood Flow and Executive Function: A Randomized, Controlled Cross-Over Trial in Sedentary Older Men.

Jordi P D Kleinloog, Ronald P Mensink, Dimo Ivanov, Jos J Adam, Kamil Uludağ, Peter J Joris

Frontiers in aging neuroscience  ·  04 Dec 2019  ·  pubmed:31866855

A dynamical model of the laminar BOLD response.

Martin Havlicek, Kâmil Uludağ

NeuroImage  ·  20 Sep 2019  ·  pubmed:31546051

Fast quantitative T1-mapping at ultra-high field using inversion-recovery echo planar imaging

Dimo Ivanov, Benedikt A. Poser, Sriranga Kashyap, Martin Havlicek, Kâmil Uludağ

F1000 Research Ltd  ·  02 Sep 2019  ·  doi:10.7490/F1000RESEARCH.1117451.1

Sub-millimetre quantitative T1 mapping using inversion-recovery EPI and application for cortical depth-dependent fMRI at 7 Tesla

Sriranga Kashyap, Dimo Ivanov, Martin Havlicek, Benedikt A. Poser, Kâmil Uludağ

F1000 Research Ltd  ·  02 Sep 2019  ·  doi:10.7490/F1000RESEARCH.1117452.1

True laminar resolution fMRI of the human visual cortex at 7T

Sriranga Kashyap, Dimo Ivanov, Martin Havlicek, Shubharthi Sengupta, Benedikt A. Poser, Kâmil Uludağ

F1000 Research Ltd  ·  02 Sep 2019  ·  doi:10.7490/F1000RESEARCH.1117448.1

Effect of optimised coil-combinations on high-resolution laminar fMRI at 9.4T

Sriranga Kashyap, Francisco J. Fritz, Robbert L. Harms, Laurentius Huber, Dimo Ivanov, Alard Roebroeck, Benedikt A. Poser, Kâmil Uludağ

F1000 Research Ltd  ·  02 Sep 2019  ·  doi:10.7490/F1000RESEARCH.1117449.1

Ultra-high spatial resolution multi-echo BOLD & VASO fMRI of the human motor cortex at 9.4 T

Sriranga Kashyap, Laurentius Huber, Dimo Ivanov, Kâmil Uludağ, David A. Feinberg, Benedikt A. Poser

F1000 Research Ltd  ·  02 Sep 2019  ·  doi:10.7490/F1000RESEARCH.1117450.1

Locus coeruleus imaging as a biomarker for noradrenergic dysfunction in neurodegenerative diseases.

Matthew J Betts, Evgeniya Kirilina, Maria C G Otaduy, Dimo Ivanov, Julio Acosta-Cabronero, …, James B Rowe, Lea T Grinberg, Heidi I L Jacobs, Emrah Düzel, Dorothea Hämmerer

Brain : a journal of neurology  ·  01 Sep 2019  ·  pubmed:31327002

Non-BOLD contrast for laminar fMRI in humans: CBF, CBV, and CMRO2

Laurentius Huber, Kâmil Uludağ, Harald E. Möller

NeuroImage  ·  01 Aug 2019  ·  doi:10.1016/j.neuroimage.2017.07.041

European Ultrahigh‐Field Imaging Network for Neurodegenerative Diseases (EUFIND)

Emrah Düzel, Julio Acosta‐Cabronero, David Berron, Geert Jan Biessels, Isabella Björkman‐Burtscher, …, Michela Tosetti, Kamil Uludag, Alexandre Vignaud, Jaco Zwanenburg, Oliver Speck

Alzheimer's & Dementia: Diagnosis, Assessment & Disease Monitoring  ·  31 Jul 2019  ·  doi:10.1016/j.dadm.2019.04.010

European Ultrahigh-Field Imaging Network for Neurodegenerative Diseases (EUFIND).

Emrah Düzel, Julio Acosta-Cabronero, David Berron, Geert Jan Biessels, Isabella Björkman-Burtscher, …, Michela Tosetti, Kamil Uludag, Alexandre Vignaud, Jaco Zwanenburg, Oliver Speck

Alzheimer's & dementia (Amsterdam, Netherlands)  ·  31 Jul 2019  ·  pubmed:31388558

Locus coeruleus imaging as a biomarker for noradrenergic dysfunction in neurodegenerative diseases

Matthew J Betts, Evgeniya Kirilina, Maria C G Otaduy, Dimo Ivanov, Julio Acosta-Cabronero, …, James B Rowe, Lea T Grinberg, Heidi I L Jacobs, Emrah Düzel, Dorothea Hämmerer

Brain  ·  20 Jul 2019  ·  doi:10.1093/brain/awz193

Depth-resolved ultra-high field fMRI reveals feedback contributions to surface motion perception

Ingo Marquardt, Peter De Weerd, Marian Schneider, Omer Faruk Gulban, Dimo Ivanov, Kâmil Uludağ

Cold Spring Harbor Laboratory  ·  30 May 2019  ·  doi:10.1101/653626

A dynamical model of the laminar BOLD response

Martin Havlicek, Kamil Uludag

Cold Spring Harbor Laboratory  ·  15 Apr 2019  ·  doi:10.1101/609099

2018

Resolving laminar activation in human V1 using ultra-high spatial resolution fMRI at 7T

Sriranga Kashyap, Dimo Ivanov, Martin Havlicek, Shubharthi Sengupta, Benedikt A. Poser, Kâmil Uludağ

Scientific Reports  ·  20 Nov 2018  ·  doi:10.1038/s41598-018-35333-3

Examples of sub-millimeter, 7T, T1-weighted EPI datasets acquired with the T123DEPI sequence

Wietske van der Zwaag, Pieter F. Buur, Alessio Fracasso, Tessa van Doesum, Kâmil Uludağ, Maarten Versluis, José P. Marques

Data in Brief  ·  01 Oct 2018  ·  doi:10.1016/j.dib.2018.08.030

Ultra-high resolution blood volume fMRI and BOLD fMRI in humans at 9.4 T: Capabilities and challenges

Laurentius Huber, Desmond H.Y. Tse, Christopher J. Wiggins, Kâmil Uludağ, Sriranga Kashyap, David C. Jangraw, Peter A. Bandettini, Benedikt A. Poser, Dimo Ivanov

NeuroImage  ·  01 Sep 2018  ·  doi:10.1016/j.neuroimage.2018.06.025

Distortion-matched T1 maps and unbiased T1-weighted images as anatomical reference for high-resolution fMRI

Wietske van der Zwaag, Pieter F. Buur, Alessio Fracasso, Tessa van Doesum, Kâmil Uludağ, Maarten J. Versluis, José P. Marques

NeuroImage  ·  01 Aug 2018  ·  doi:10.1016/j.neuroimage.2018.04.026

Cortical depth profiles of luminance contrast responses in human V1 and V2 using 7 T fMRI

Ingo Marquardt, Marian Schneider, Omer Faruk Gulban, Dimo Ivanov, Kâmil Uludağ

Human Brain Mapping  ·  25 Mar 2018  ·  doi:10.1002/hbm.24042

The impact of ultra-high field MRI on cognitive and computational neuroimaging

Federico De Martino, Essa Yacoub, Valentin Kemper, Michelle Moerel, Kâmil Uludağ, Peter De Weerd, Kamil Ugurbil, Rainer Goebel, Elia Formisano

NeuroImage  ·  01 Mar 2018  ·  doi:10.1016/j.neuroimage.2017.03.060

Neuroimaging with ultra-high field MRI: Present and future

Jonathan R. Polimeni, Kâmil Uludağ

NeuroImage  ·  01 Mar 2018  ·  doi:10.1016/j.neuroimage.2018.01.072

Linking brain vascular physiology to hemodynamic response in ultra-high field MRI

Kâmil Uludağ, Pablo Blinder

NeuroImage  ·  01 Mar 2018  ·  doi:10.1016/j.neuroimage.2017.02.063

Individualized parcellation of the subthalamic nucleus in patients with Parkinson's disease with 7T MRI

Birgit R. Plantinga, Yasin Temel, Yuval Duchin, Kâmil Uludağ, Rémi Patriat, …, Mark Kuijf, Ali Jahanshahi, Bart ter Haar Romenij, Jerrold Vitek, Noam Harel

NeuroImage  ·  01 Mar 2018  ·  doi:10.1016/j.neuroimage.2016.09.023

Impact of acquisition and analysis strategies on cortical depth-dependent fMRI

Sriranga Kashyap, Dimo Ivanov, Martin Havlicek, Benedikt A. Poser, Kâmil Uludağ

NeuroImage  ·  01 Mar 2018  ·  doi:10.1016/j.neuroimage.2017.05.022

High-resolution in vivo imaging of human locus coeruleus by magnetization transfer MRI at 3T and 7T

Nikos Priovoulos, Heidi I.L. Jacobs, Dimo Ivanov, Kâmil Uludağ, Frans R.J. Verhey, Benedikt A. Poser

NeuroImage  ·  01 Mar 2018  ·  doi:10.1016/j.neuroimage.2017.07.045

The impact of correction on MP2RAGE cortical T₁ and apparent cortical thickness at 7T

Roy A.M. Haast, Dimo Ivanov, Kâmil Uludağ

Human Brain Mapping  ·  18 Feb 2018  ·  doi:10.1002/hbm.24011

Techniques for blood volume fMRI with VASO: From low-resolution mapping towards sub-millimeter layer-dependent applications

Laurentius Huber, Dimo Ivanov, Daniel A. Handwerker, Sean Marrett, Maria Guidi, Kâmil Uludağ, Peter A. Bandettini, Benedikt A. Poser

NeuroImage  ·  01 Jan 2018  ·  doi:10.1016/j.neuroimage.2016.11.039

Anatomic & metabolic brain markers of the m.3243A>G mutation: A multi-parametric 7T MRI study

Roy A.M. Haast, Dimo Ivanov, Rutger J.T. IJsselstein, Suzanne C.E.H. Sallevelt, Jacobus F.A. Jansen, Hubert J.M. Smeets, Irenaeus F.M. de Coo, Elia Formisano, Kâmil Uludağ

NeuroImage: Clinical  ·  01 Jan 2018  ·  doi:10.1016/j.nicl.2018.01.017

2017

Pulsatility of Lenticulostriate Arteries Assessed by 7 Tesla Flow MRI—Measurement, Reproducibility, and Applicability to Aging Effect

Roald S. Schnerr, Jacobus F. A. Jansen, Kamil Uludag, Paul A. M. Hofman, Joachim E. Wildberger, Robert J. van Oostenbrugge, Walter H. Backes

Frontiers in Physiology  ·  24 Nov 2017  ·  doi:10.3389/fphys.2017.00961

Determining Excitatory and Inhibitory Neuronal Activity from Multimodal fMRI Data Using a Generative Hemodynamic Model

Martin Havlicek, Dimo Ivanov, Alard Roebroeck, Kamil Uludağ

Frontiers in Neuroscience  ·  10 Nov 2017  ·  doi:10.3389/fnins.2017.00616

Echo-time dependence of the BOLD response transients – A window into brain functional physiology

Martin Havlicek, Dimo Ivanov, Benedikt A. Poser, Kamil Uludag

NeuroImage  ·  01 Oct 2017  ·  doi:10.1016/j.neuroimage.2017.07.034

Subthalamic Nucleus Deep Brain Stimulation: Basic Concepts and Novel Perspectives.

Clement Hamani, Gerson Florence, Helmut Heinsen, Birgit R Plantinga, Yasin Temel, Kamil Uludag, Eduardo Alho, Manoel J Teixeira, Edson Amaro, Erich T Fonoff

eNeuro  ·  22 Sep 2017  ·  pubmed:28966978

Subthalamic Nucleus Deep Brain Stimulation: Basic Concepts and Novel Perspectives

Clement Hamani, Gerson Florence, Helmut Heinsen, Birgit R. Plantinga, Yasin Temel, Kamil Uludag, Eduardo Alho, Manoel J. Teixeira, Edson Amaro, Erich T. Fonoff

eneuro  ·  01 Sep 2017  ·  doi:10.1523/ENEURO.0140-17.2017

Comparison of 3 T and 7 T ASL techniques for concurrent functional perfusion and BOLD studies

Dimo Ivanov, Anna Gardumi, Roy A.M. Haast, Josef Pfeuffer, Benedikt A. Poser, Kâmil Uludağ

NeuroImage  ·  01 Aug 2017  ·  doi:10.1016/j.neuroimage.2017.05.038

On the importance of modeling fMRI transients when estimating effective connectivity: A dynamic causal modeling study using ASL data

Martin Havlicek, Alard Roebroeck, Karl J. Friston, Anna Gardumi, Dimo Ivanov, Kamil Uludag

NeuroImage  ·  01 Jul 2017  ·  doi:10.1016/j.neuroimage.2017.03.017

2016

Reproducibility and Reliability of Quantitative and Weighted T1 and T2∗ Mapping for Myelin-Based Cortical Parcellation at 7 Tesla

Roy A. M. Haast, Dimo Ivanov, Elia Formisano, Kâmil Uludaǧ

Frontiers in Neuroanatomy  ·  18 Nov 2016  ·  doi:10.3389/fnana.2016.00112

Tonotopic maps in human auditory cortex using arterial spin labeling

Anna Gardumi, Dimo Ivanov, Martin Havlicek, Elia Formisano, Kâmil Uludağ

Human Brain Mapping  ·  28 Oct 2016  ·  doi:10.1002/hbm.23444

Optimization of simultaneous multislice EPI for concurrent functional perfusion and BOLD signal measurements at 7T

Dimo Ivanov, Benedikt A Poser, Laurentius Huber, Josef Pfeuffer, Kâmil Uludağ

Magnetic Resonance in Medicine  ·  28 Jul 2016  ·  doi:10.1002/mrm.26351

Ultra-High Field MRI Post Mortem Structural Connectivity of the Human Subthalamic Nucleus, Substantia Nigra, and Globus Pallidus

Birgit R. Plantinga, Alard Roebroeck, Valentin G. Kemper, Kâmil Uludağ, Maartje Melse, …, Mark L. Kuijf, Andreas Herrler, Ali Jahanshahi, Bart M. ter Haar Romeny, Yasin Temel

Frontiers in Neuroanatomy  ·  16 Jun 2016  ·  doi:10.3389/fnana.2016.00066

The effect of spatial resolution on decoding accuracy in fMRI multivariate pattern analysis

Anna Gardumi, Dimo Ivanov, Lars Hausfeld, Giancarlo Valente, Elia Formisano, Kâmil Uludağ

NeuroImage  ·  01 May 2016  ·  doi:10.1016/j.neuroimage.2016.02.033

Volumetric imaging with homogenised excitation and static field at 9.4 T

Desmond H. Y. Tse, Christopher J. Wiggins, Dimo Ivanov, Daniel Brenner, Jens Hoffmann, Christian Mirkes, Gunamony Shajan, Klaus Scheffler, Kâmil Uludağ, Benedikt A. Poser

Magnetic Resonance Materials in Physics, Biology and Medicine  ·  19 Mar 2016  ·  doi:10.1007/s10334-016-0543-6

fMRI Adaptation between Action Observation and Action Execution Reveals Cortical Areas with Mirror Neuron Properties in Human BA 44/45

Stephan de la Rosa, Frieder L. Schillinger, Heinrich H. Bülthoff, Johannes Schultz, Kamil Uludag

Frontiers in Human Neuroscience  ·  29 Feb 2016  ·  doi:10.3389/fnhum.2016.00078

Towards an optimal analysis of laminar-resolved fMRI

Martin Havlicek, Dimo Ivanov, Kamil Uludag

Unpublished  ·  01 Jan 2016  ·  doi:10.13140/RG.2.1.2737.3041

Functional cerebral blood volume mapping with simultaneous multi-slice acquisition

Laurentius Huber, Dimo Ivanov, Maria Guidi, Robert Turner, Kâmil Uludağ, Harald E. Möller, Benedikt A. Poser

NeuroImage  ·  01 Jan 2016  ·  doi:10.1016/j.neuroimage.2015.10.082

2015

Physiologically informed dynamic causal modeling of fMRI data

Martin Havlicek, Alard Roebroeck, Karl Friston, Anna Gardumi, Dimo Ivanov, Kamil Uludag

NeuroImage  ·  01 Nov 2015  ·  doi:10.1016/j.neuroimage.2015.07.078

Affected functional networks associated with sentence production in classic galactosemia

Inge Timmers, Job van den Hurk, Paul AM Hofman, Luc JI Zimmermann, Kâmil Uludağ, Bernadette M Jansma, M Estela Rubio-Gozalbo

Brain Research  ·  01 Aug 2015  ·  doi:10.1016/j.brainres.2015.05.007

¹⁷O relaxation times in the rat brain at 16.4 tesla

Hannes M. Wiesner, Dávid Z. Balla, G. Shajan, Klaus Scheffler, Kâmil Uğurbil, Wei Chen, Kâmil Uludağ, Rolf Pohmann

Magnetic Resonance in Medicine  ·  22 Jun 2015  ·  doi:10.1002/mrm.25814

fMRI: From Nuclear Spins to Brain Functions

Biological Magnetic Resonance  ·  01 Jan 2015  ·  doi:10.1007/978-1-4899-7591-1

Physiology and Physics of the fMRI Signal

Kâmil Uludağ, Kâmil Uğurbil

Biological Magnetic Resonance  ·  01 Jan 2015  ·  doi:10.1007/978-1-4899-7591-1_8

Functional MRI Dynamics

K. Uludağ

Brain Mapping  ·  01 Jan 2015  ·  doi:10.1016/B978-0-12-397025-1.00008-7

Combining fMRI with Other Modalities: Multimodal Neuroimaging

Louis Lemieux, Kevin Whittingstall, Kâmil Uludağ

Biological Magnetic Resonance  ·  01 Jan 2015  ·  doi:10.1007/978-1-4899-7591-1_25

2014

Ultra-high field magnetic resonance imaging of the basal ganglia and related structures

Birgit R. Plantinga, Yasin Temel, Alard Roebroeck, Kâmil Uludağ, Dimo Ivanov, Mark L. Kuijf, Bart M. ter Haar Romenij

Frontiers in Human Neuroscience  ·  05 Nov 2014  ·  doi:10.3389/fnhum.2014.00876

General overview on the merits of multimodal neuroimaging data fusion

Kâmil Uludağ, Alard Roebroeck

NeuroImage  ·  01 Nov 2014  ·  doi:10.1016/j.neuroimage.2014.05.018

2013

Spatial representations of temporal and spectral sound cues in human auditory cortex

Marcus Herdener, Fabrizio Esposito, Klaus Scheffler, Peter Schneider, Nikos K. Logothetis, Kamil Uludag, Christoph Kayser

Cortex  ·  01 Nov 2013  ·  doi:10.1016/j.cortex.2013.04.003

On the feasibility of concurrent human TMS-EEG-fMRI measurements

Judith C. Peters, Joel Reithler, Teresa Schuhmann, Tom de Graaf, Kâmil Uludağ, Rainer Goebel, Alexander T. Sack

Journal of Neurophysiology  ·  15 Feb 2013  ·  doi:10.1152/jn.00071.2012

2012

Regional effects of magnetization dispersion on quantitative perfusion imaging for pulsed and continuous arterial spin labeling

Mustafa Çavuşoğlu, Rolf Pohmann, Harold Christopher Burger, Kâmil Uludağ

Magnetic Resonance in Medicine  ·  09 Apr 2012  ·  doi:10.1002/mrm.24278

Retinotopic maps and hemodynamic delays in the human visual cortex measured using arterial spin labeling

Mustafa Cavusoglu, Andreas Bartels, Baris Yesilyurt, Kâmil Uludağ

NeuroImage  ·  01 Feb 2012  ·  doi:10.1016/j.neuroimage.2011.10.056

Network-based statistics for a community driven transparent publication process

Jan Zimmermann, Alard Roebroeck, Kamil Uludag, Alexander Sack, Elia Formisano, Bernadette Jansma, Peter De Weerd, Rainer Goebel

Frontiers in Computational Neuroscience  ·  01 Jan 2012  ·  doi:10.3389/fncom.2012.00011

2011

On the numerically predicted spatial BOLD fMRI specificity for spin echo sequences

Daniel Pflugfelder, Kaveh Vahedipour, Kamil Uludağ, N. Jon Shah, Tony Stöcker

Magnetic Resonance Imaging  ·  01 Nov 2011  ·  doi:10.1016/j.mri.2011.07.015

Convergence of human brain mapping tools: Neuronavigated TMS Parameters and fMRI activity in the hand motor area

Anna‐Sophia Sarfeld, Svenja Diekhoff, Ling E. Wang, Gianpiero Liuzzi, Kamil Uludağ, Simon B. Eickhoff, Gereon R. Fink, Christian Grefkes

Human Brain Mapping  ·  21 Apr 2011  ·  doi:10.1002/hbm.21272

Quantifying the Link between Anatomical Connectivity, Gray Matter Volume and Regional Cerebral Blood Flow: An Integrative MRI Study

Bálint Várkuti, Mustafa Cavusoglu, Alexander Kullik, Björn Schiffler, Ralf Veit, …, Wolfgang Rosenstiel, Christoph Braun, Kamil Uludag, Niels Birbaumer, Ranganatha Sitaram

PLoS ONE  ·  15 Apr 2011  ·  doi:10.1371/journal.pone.0014801

Differential effects of intranasal insulin and caffeine on cerebral blood flow

Yuko Grichisch, Mustafa Çavuşoğlu, Hubert Preissl, Kamil Uludağ, Manfred Hallschmid, Niels Birbaumer, Hans U. Häring, Andreas Fritsche, Ralf Veit

Human Brain Mapping  ·  09 Mar 2011  ·  doi:10.1002/hbm.21216

Functional localization in the human brain: Gradient‐echo, spin‐echo, and arterial spin‐labeling fMRI compared with neuronavigated TMS

Svenja Diekhoff, Kamil Uludağ, Roland Sparing, Marc Tittgemeyer, Mustafa Cavuşoğlu, D. Yves von Cramon, Christian Grefkes

Human Brain Mapping  ·  14 Feb 2011  ·  doi:10.1002/hbm.21024

2010

Predictors of Response to Treadmill Exercise in Stroke Survivors

Judith M. Lam, Christoph Globas, Joachim Cerny, Benjamin Hertler, Kamil Uludag, Larry W. Forrester, Richard F. Macko, Daniel F. Hanley, Clemens Becker, Andreas R. Luft

Neurorehabilitation and Neural Repair  ·  07 May 2010  ·  doi:10.1177/1545968310364059

To dip or not to dip: Reconciling optical imaging and fMRI data

Kâmil Uludağ

Proceedings of the National Academy of Sciences  ·  09 Feb 2010  ·  doi:10.1073/pnas.0914194107

Interleaved TMS/CASL: Comparison of different rTMS protocols

Marius Moisa, Rolf Pohmann, Kamil Uludağ, Axel Thielscher

NeuroImage  ·  01 Jan 2010  ·  doi:10.1016/j.neuroimage.2009.07.010

2009

Relationship of the BOLD Signal with VEP for Ultrashort Duration Visual Stimuli (0.1 to 5 ms) in Humans

Barış Yeşilyurt, Kevin Whittingstall, Kâmil Uğurbil, Nikos K Logothetis, Kâmil Uludağ

Journal of Cerebral Blood Flow & Metabolism  ·  21 Oct 2009  ·  doi:10.1038/jcbfm.2009.224

Neural activity-induced modulation of BOLD poststimulus undershoot independent of the positive signal

Sepideh Sadaghiani, Kâmil Uğurbil, Kâmil Uludağ

Magnetic Resonance Imaging  ·  01 Oct 2009  ·  doi:10.1016/j.mri.2009.04.003

Comparison of pulsed arterial spin labeling encoding schemes and absolute perfusion quantification

Mustafa Çavuşoğlu, Josef Pfeuffer, Kâmil Uğurbil, Kâmil Uludağ

Magnetic Resonance Imaging  ·  01 Oct 2009  ·  doi:10.1016/j.mri.2009.04.002

An integrative model for neuronal activity-induced signal changes for gradient and spin echo functional imaging

Kâmil Uludağ, Bernd Müller-Bierl, Kâmil Uğurbil

NeuroImage  ·  01 Oct 2009  ·  doi:10.1016/j.neuroimage.2009.05.051

Latin American Brain Mapping Network (LABMAN)

K. Uludağ, A.C. Evans, V. Della-Maggiore, S. Kochen, E. Amaro, O. Sierra, P. Valdés-Hernandez, V. Medina, P. Valdés-Sosa

NeuroImage  ·  01 Aug 2009  ·  doi:10.1016/j.neuroimage.2009.03.030

2008

Transient and sustained BOLD responses to sustained visual stimulation

Kâmil Uludağ

Magnetic Resonance Imaging  ·  01 Sep 2008  ·  doi:10.1016/j.mri.2008.01.049

Dynamics and nonlinearities of the BOLD response at very short stimulus durations

Bariş Yeşilyurt, Kâmil Uğurbil, Kâmil Uludağ

Magnetic Resonance Imaging  ·  01 Sep 2008  ·  doi:10.1016/j.mri.2008.01.008

Direct measurement of oxygen extraction with fMRI using 6% CO2 inhalation

Anne C. Zappe, Kâmil Uludağ, Nikos K. Logothetis

Magnetic Resonance Imaging  ·  01 Sep 2008  ·  doi:10.1016/j.mri.2008.02.005

Decreases in ADC observed in tissue areas during activation in the cat visual cortex at 9.4 T using high diffusion sensitization

Essa Yacoub, Kâmil Uludağ, Kâmil Uğurbil, Noam Harel

Magnetic Resonance Imaging  ·  01 Sep 2008  ·  doi:10.1016/j.mri.2008.01.046

Simultaneous PET-MRI: a new approach for functional and morphological imaging

Martin S Judenhofer, Hans F Wehrl, Danny F Newport, Ciprian Catana, Stefan B Siegel, …, Hans-Jürgen Machulla, Kamil Uludag, Simon R Cherry, Claus D Claussen, Bernd J Pichler

Nature Medicine  ·  23 Mar 2008  ·  doi:10.1038/nm1700

The Influence of Moderate Hypercapnia on Neural Activity in the Anesthetized Nonhuman Primate

A. C. Zappe, K. Uludag, A. Oeltermann, K. Ugurbil, N. K. Logothetis

Cerebral Cortex  ·  06 Mar 2008  ·  doi:10.1093/cercor/bhn023

2007

Magnetic Field Distribution and Signal Decay in Functional MRI in Very High Fields (up to 9.4 T) Using Monte Carlo Diffusion Modeling

Bernd Michael Mueller-Bierl, Kamil Uludag, Philippe L. Pereira, Fritz Schick

International Journal of Biomedical Imaging  ·  01 Jan 2007  ·  doi:10.1155/2007/70309

2006

Relevance of depth resolution for cerebral blood flow monitoring by near-infrared spectroscopic bolus tracking during cardiopulmonary bypass

Jens Steinbrink, Thomas Fischer, Hermann Kuppe, Roland Hetzer, Kamil Uludag, Hellmuth Obrig, Wolfgang M. Kuebler

The Journal of Thoracic and Cardiovascular Surgery  ·  01 Nov 2006  ·  doi:10.1016/j.jtcvs.2006.05.065

Frontiers of brain mapping using MRI

Noam Harel, Kâmil Uǧurbil, Kâmil Uludaǧ, Essa Yacoub

Journal of Magnetic Resonance Imaging  ·  28 Apr 2006  ·  doi:10.1002/jmri.20576

Investigating the post-stimulus undershoot of the BOLD signal—a simultaneous fMRI and fNIRS study

Matthias L. Schroeter, Thomas Kupka, Toralf Mildner, Kâmil Uludağ, D. Yves von Cramon

NeuroImage  ·  01 Apr 2006  ·  doi:10.1016/j.neuroimage.2005.09.048

2004

Caffeine alters the temporal dynamics of the visual BOLD response

Thomas T. Liu, Yashar Behzadi, Khaled Restom, Kamil Uludag, Kun Lu, Giedrius T. Buracas, David J. Dubowitz, Richard B. Buxton

NeuroImage  ·  01 Dec 2004  ·  doi:10.1016/j.neuroimage.2004.07.061

Coupling of cerebral blood flow and oxygen consumption during physiological activation and deactivation measured with fMRI

Kâmil Uludağ, David J. Dubowitz, Elizabeth J. Yoder, Khaled Restom, Thomas T. Liu, Richard B. Buxton

NeuroImage  ·  01 Sep 2004  ·  doi:10.1016/j.neuroimage.2004.05.013

Separability and cross talk: optimizing dual wavelength combinations for near-infrared spectroscopy of the adult head

Kâmil Uludağ, Jens Steinbrink, Arno Villringer, Hellmuth Obrig

NeuroImage  ·  01 Jun 2004  ·  doi:10.1016/j.neuroimage.2004.02.023

Cytochrome-c-oxidase redox changes during visual stimulation measured by near-infrared spectroscopy cannot be explained by a mere cross talk artefact

Kâmil Uludağ, Jens Steinbrink, Matthias Kohl-Bareis, Rüdiger Wenzel, Arno Villringer, Hellmuth Obrig

NeuroImage  ·  01 May 2004  ·  doi:10.1016/j.neuroimage.2003.09.053

Investigating the physiology of brain activation with MRI

Richard B. Buxton, Kamil Uludag, David J. Dubowitz

SPIE Proceedings  ·  30 Apr 2004  ·  doi:10.1117/12.536820

Towards a standard analysis for functional near-infrared imaging

Matthias L Schroeter, Markus M Bücheler, Karsten Müller, Kâmil Uludağ, Hellmuth Obrig, Gabriele Lohmann, Marc Tittgemeyer, Arno Villringer, D.Yves von Cramon

NeuroImage  ·  01 Jan 2004  ·  doi:10.1016/j.neuroimage.2003.09.054

Neurovascular coupling analyzed non-invasively in the human brain

Bruno-Marcel Mackert, Gerd Wübbeler, Stefanie Leistner, Kamil Uludag, Hellmuth Obrig, Arno Villringer, Lutz Trahms, Gabriel Curio

NeuroReport  ·  01 Jan 2004  ·  doi:10.1097/00001756-200401190-00013

Modeling the hemodynamic response to brain activation

Richard B. Buxton, Kâmil Uludağ, David J. Dubowitz, Thomas T. Liu

NeuroImage  ·  01 Jan 2004  ·  doi:10.1016/j.neuroimage.2004.07.013

2003

Functional brain imaging by CW-NIRS coregistered by blood flow monitors

Jens M. Steinbrink, Florian Kempf, Stephan Schreiber, Kamil Uludag, Matthias Kohl, Jose M. Valdueza, Arno Villringer, Hellmuth Obrig

SPIE Proceedings  ·  15 Oct 2003  ·  doi:10.1117/12.500479

2002

Habituation of the Visually Evoked Potential and Its Vascular Response: Implications for Neurovascular Coupling in the Healthy Adult

Hellmuth Obrig, Heike Israel, Matthias Kohl-Bareis, Kamil Uludag, Rüdiger Wenzel, Bianca Müller, Guy Arnold, Arno Villringer

NeuroImage  ·  01 Sep 2002  ·  doi:10.1006/nimg.2002.1177

Noninvasive monitoring of cerebral blood flow by a dye bolus method: Separation of brain from skin and skull signals

Hellmuth Obrig

Journal of Biomedical Optics  ·  01 Jul 2002  ·  doi:10.1117/1.1482719

Dopplersonographic measurement of global cerebral circulation time using echo contrast-enhanced ultrasound in normal individuals and patients with arteriovenous malformations

Stephan Joachim Schreiber, Uwe Franke, Florian Doepp, Elda Staccioli, Kamil Uludag, JosÉ Manuel Valdueza

Ultrasound in Medicine & Biology  ·  01 Apr 2002  ·  doi:10.1016/S0301-5629(02)00477-5

Cross talk in the Lambert-Beer calculation for near-infrared wavelengths estimated by Monte Carlo simulations

K. Uludag, M. Kohl, J. Steinbrink, H. Obrig, A. Villringer

Journal of Biomedical Optics  ·  01 Jan 2002  ·  doi:10.1117/1.1427048

2001

Noninvasive cerebral blood flow monitoring by a dye bolus method:separation of extra- and intracerebral absorption changes by frequency-domain spectroscopy

Matthias Kohl-Bareis, Hellmuth Obrig, Jens Steinbrink, Jasmin Malak, Kamil Uludag, Arno Villringer

SPIE Proceedings  ·  29 Jun 2001  ·  doi:10.1117/12.434501

SIMULTANE MESSUNG VON DC-MEG UND NAHINFRAROTSPEKTROSKOPIE (NIRS) BEI MOTORISCHER AKTIVIERUNG

G. Wübbeler, S. Leistner, B.-M. Mackert, M. Burghoff, K. Uludag, H. Obrig, M. Kohl, A. Villringer, G. Curio, L. Trahms

Biomedizinische Technik/Biomedical Engineering  ·  01 Jan 2001  ·  doi:10.1515/bmte.2001.46.s1.272